MGYG_01854 protein (Nannizzia gypsea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MGYG_01854

Uncharacterized protein. (142 aa)

Predicted Functional Partners:

MGYG_04155

0.896

MGYG_08926

0.618

MGYG_04088

0.610

MGYG_09178

0.605

MGYG_07396

0.519

MGYG_03924

0.514

MGYG_00286

0.494

MGYG_03862

0.491

MGYG_04545

0.489

MGYG_01863

0.462

Your Current Organism:

Nannizzia gypsea

NCBI taxonomy Id: 535722
Other names: Arthroderma gypseum CBS 118893, Microsporum gypseum CBS 118893, N. gypsea CBS 118893, Nannizzia gypsea CBS 118893

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MGYG_00286	MGYG_01854	E5QYQ6	E5R3Z3	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	Uncharacterized protein.	0.494
MGYG_00286	MGYG_03862	E5QYQ6	E4UU91	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	Uncharacterized protein.	0.703
MGYG_00286	MGYG_04088	E5QYQ6	E4UUW8	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	ANK_REP_REGION domain-containing protein.	0.436
MGYG_00286	MGYG_04545	E5QYQ6	E4UTQ0	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	Lin-12 protein 9 suppressor/enhancer.	0.713
MGYG_00286	MGYG_09178	E5QYQ6	E4V4F2	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	Serine/threonine protein kinase.	0.423
MGYG_01854	MGYG_00286	E5R3Z3	E5QYQ6	Uncharacterized protein.	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	0.494
MGYG_01854	MGYG_01863	E5R3Z3	E5R402	Uncharacterized protein.	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	0.462
MGYG_01854	MGYG_03862	E5R3Z3	E4UU91	Uncharacterized protein.	Uncharacterized protein.	0.491
MGYG_01854	MGYG_03924	E5R3Z3	E4UUF4	Uncharacterized protein.	Uncharacterized protein.	0.514
MGYG_01854	MGYG_04088	E5R3Z3	E4UUW8	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.610
MGYG_01854	MGYG_04155	E5R3Z3	E4UV34	Uncharacterized protein.	Uncharacterized protein.	0.896
MGYG_01854	MGYG_04545	E5R3Z3	E4UTQ0	Uncharacterized protein.	Lin-12 protein 9 suppressor/enhancer.	0.489
MGYG_01854	MGYG_07396	E5R3Z3	E4V315	Uncharacterized protein.	Uncharacterized protein.	0.519
MGYG_01854	MGYG_08926	E5R3Z3	E5R018	Uncharacterized protein.	Uncharacterized protein.	0.618
MGYG_01854	MGYG_09178	E5R3Z3	E4V4F2	Uncharacterized protein.	Serine/threonine protein kinase.	0.605
MGYG_01863	MGYG_01854	E5R402	E5R3Z3	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.462
MGYG_01863	MGYG_04088	E5R402	E4UUW8	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	ANK_REP_REGION domain-containing protein.	0.670
MGYG_03862	MGYG_00286	E4UU91	E5QYQ6	Uncharacterized protein.	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	0.703
MGYG_03862	MGYG_01854	E4UU91	E5R3Z3	Uncharacterized protein.	Uncharacterized protein.	0.491
MGYG_03862	MGYG_04545	E4UU91	E4UTQ0	Uncharacterized protein.	Lin-12 protein 9 suppressor/enhancer.	0.753