STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UTP25U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (713 aa)    
Predicted Functional Partners:
MGYG_04534
Sas10/Utp3 family protein.
   
 0.999
MGYG_04912
Nucleolar complex protein 14.
   
 0.998
MGYG_05775
U3 small nucleolar RNA-associated protein 22.
   
 0.996
MGYG_02249
U3 small nucleolar RNA-associated protein 7.
   
 
  0.995
MGYG_05436
rRNA biogenesis protein RRP5.
   
 
 0.995
MGYG_01151
ATP-dependent RNA helicase DBP8; Belongs to the DEAD box helicase family.
   
 
 0.994
MGYG_08540
rRNA-processing protein FCF1.
   
 
 0.993
MGYG_02919
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.992
MGYG_05158
Nucleolar complex protein 4.
   
 0.992
MGYG_06453
Uncharacterized protein.
   
 0.992
Your Current Organism:
Nannizzia gypsea
NCBI taxonomy Id: 535722
Other names: Arthroderma gypseum CBS 118893, Microsporum gypseum CBS 118893, N. gypsea CBS 118893, Nannizzia gypsea CBS 118893
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.