STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH84919.1Nickel-cobalt-cadmium resistance protein NccN; COGs: COG2020 Putative protein-S-isoprenylcysteine methyltransferase; KEGG: mlo:mll5060 nickel-cobalt-cadmium resistance protein NccN; SPTR: Nickel-cobalt-cadmium resistance protein NccN; PFAM: Phospholipid methyltransferase. (208 aa)    
Predicted Functional Partners:
AEH87640.1
WD40 repeat, subgroup; COGs: COG2319 FOG: WD40 repeat; InterProIPR019782:IPR017986:IPR020472:IPR001680:IPR 019781:IPR019775; KEGG: mlo:mll2069 transcriptional repressor; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat protein; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat.
    
 0.639
infC
Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
       0.525
rpmI
COGs: COG0291 Ribosomal protein L35; InterPro IPR001706:IPR018265; KEGG: mlo:msl5059 50S ribosomal protein L35; PFAM: ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
       0.494
AEH87093.1
KEGG: mlo:mlr5633 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.477
AEH87120.1
COGs: COG2020 Putative protein-S-isoprenylcysteine methyltransferase; InterPro IPR007269; KEGG: mlo:mlr6490 nickel-cobalt-cadmium resistance protein; PFAM: Isoprenylcysteine carboxyl methyltransferase; SPTR: Isoprenylcysteine carboxyl methyltransferase; PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family.
  
     0.419
AEH89465.1
Protein of unknown function DUF374; COGs: COG2121 conserved hypothetical protein; InterPro IPR007172; KEGG: mlo:mlr8268 hypothetical protein; PFAM: protein of unknown function DUF374; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF374).
 
     0.419
AEH87337.1
InterPro IPR004360; KEGG: kfl:Kfla_4696 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
  
     0.400
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.