STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH84929.1COGs: COG3038 Cytochrome B561; InterPro IPR011577; KEGG: mlo:mll5049 cytochrome b561; PFAM: cytochrome B561; SPTR: Cytochrome B561; PFAM: Cytochrome b(N-terminal)/b6/petB. (190 aa)    
Predicted Functional Partners:
AEH84930.1
YceI family protein; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: mlo:mll5048 hypothetical protein; PFAM: YceI family protein; SPTR: YceI family protein; PFAM: YceI-like domain; Belongs to the UPF0312 family.
 
  
 0.782
AEH90442.1
COGs: COG3038 Cytochrome B561; InterPro IPR011577; KEGG: rec:RHECIAT_CH0004163 probable cytochrome b561 protein; PFAM: cytochrome B561; SPTR: Cytochrome B561; PFAM: Cytochrome b(N-terminal)/b6/petB.
  
     0.662
AEH87509.1
YceI family protein; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: azl:AZL_b00120 protein; PFAM: YceI family protein; SPTR: YceI family protein; PFAM: YceI-like domain; Belongs to the UPF0312 family.
 
  
 0.574
AEH84928.1
InterPro IPR002559; KEGG: rpc:RPC_2070 transposase, IS4; PFAM: transposase IS4 family protein; SPTR: Transposase IS4 family protein; PFAM: Transposase DDE domain.
       0.524
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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