STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH85357.1Import inner membrane translocase subunit Tim44; COGs: COG4395 conserved hypothetical protein; InterPro IPR016985:IPR007379; KEGG: mlo:mlr4544 hypothetical protein; PFAM: import inner membrane translocase subunit Tim44; SPTR: Import inner membrane translocase subunit Tim44; PFAM: Tim44-like domain. (236 aa)    
Predicted Functional Partners:
AEH85360.1
Transcriptional regulator, XRE family; InterPro IPR001387; KEGG: mlo:mlr4548 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.
 
     0.784
AEH85358.1
MltA domain protein; COGs: COG2821 Membrane-bound lytic murein transglycosylase; InterPro IPR005300:IPR010611; KEGG: mlo:mlr4546 outer membrane lipoprotein GNA33, membrane-bound lytic murein transglycosylase; PFAM: MltA domain protein; 3D domain protein; SPTR: MltA domain protein; PFAM: MltA specific insert domain; 3D domain.
 
     0.768
AEH85359.1
Smr protein/MutS2; COGs: COG2840 conserved hypothetical protein; InterPro IPR002625; KEGG: mlo:mlr4547 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; SPTR: Mlr4547 protein; PFAM: Smr domain.
 
     0.767
AEH85888.1
Protein of unknown function DUF1013; COGs: COG3820 conserved hypothetical protein; InterPro IPR010421; KEGG: mlo:mll3765 hypothetical protein; PFAM: protein of unknown function DUF1013; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1013).
  
     0.760
AEH84899.1
Double-strand break repair protein AddB; COGs: COG3893 Inactivated superfamily I helicase; InterPro IPR014153; KEGG: mlo:mll5084 hypothetical protein; SPTR: Double-strand break repair protein AddB; TIGRFAM: double-strand break repair protein AddB; TIGRFAM: double-strand break repair protein AddB, alphaproteobacterial type.
  
     0.748
AEH85399.1
COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372:IPR005790; KEGG: mlo:mlr4475 DNA polymerase III subunit delta; PFAM: DNA polymerase III delta; SPTR: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit.
 
     0.732
AEH84900.1
Double-strand break repair helicase AddA; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR014016:IPR014017:IPR000212:IPR014151; KEGG: mlo:mll5083 ATP-dependent nuclease subunit A; PFAM: UvrD/REP helicase; SPTR: Double-strand break repair helicase AddA; TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; TIGRFAM: double-strand break repair helicase AddA, alphaproteobacterial type; Belongs to the helicase family. UvrD subfamily.
 
     0.705
AEH88043.1
Protein of unknown function DUF1321; COGs: COG3814 conserved hypothetical protein; InterPro IPR010747; KEGG: mlo:mlr1474 hypothetical protein; PFAM: protein of unknown function DUF1321; SPTR: Putative uncharacterized protein; PFAM: Stringent starvation protein B.
  
     0.685
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
 
     0.679
AEH85557.1
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.671
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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