STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH85426.1Peptidase S16 lon domain protein; COGs: COG2802 Uncharacterized protein similar to the N-terminal domain of Lon protease; InterPro IPR003111; KEGG: mlo:mll4430 hypothetical protein; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; SPTR: Peptidase S16 lon domain protein; PFAM: ATP-dependent protease La (LON) domain. (223 aa)    
Predicted Functional Partners:
AEH84502.1
UBA/THIF-type NAD/FAD binding protein; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901; KEGG: mlo:mll5577 molybdopterin biosynthesis protein MoeB; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; SPTR: UBA/THIF-type NAD/FAD binding protein; PFAM: MoeZ/MoeB domain; ThiF family.
    
 0.756
AEH90644.1
UBA/THIF-type NAD/FAD binding protein; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594; KEGG: syn:sll6053 hypothetical protein; PFAM: UBA/THIF-type NAD/FAD binding protein; SPTR: UBA/THIF-type NAD/FAD binding protein; PFAM: ThiF family.
    
 0.756
AEH85425.1
Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR013026:IPR017936:IPR006662:IPR013766:IPR 005746:IPR017937; KEGG: mlo:mll4432 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin.
  
  
 0.592
AEH84573.1
Conserved hypothetical protein; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; KEGG: mlo:mll5484 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily.
     
 0.526
AEH85996.1
Beta-lactamase domain protein; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; KEGG: dda:Dd703_0270 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.
     
 0.526
AEH85427.1
Protein of unknown function DUF343; COGs: COG2835 conserved hypothetical protein; InterPro IPR005651; KEGG: mlo:msl4429 hypothetical protein; PFAM: protein of unknown function DUF343; SPTR: Putative uncharacterized protein; PFAM: Trm112p-like protein; Belongs to the UPF0434 family.
       0.522
AEH85044.1
InterPro IPR002636; KEGG: mch:Mchl_3241 protein of unknown function DUF29; PFAM: protein of unknown function DUF29; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF29.
 
 
  0.471
AEH85424.1
YbaK/prolyl-tRNA synthetase associated region; COGs: COG3760 conserved hypothetical protein; InterPro IPR007214; KEGG: mlo:mll4433 hypothetical protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; SPTR: YbaK/prolyl-tRNA synthetase associated region; PFAM: YbaK / prolyl-tRNA synthetases associated domain.
       0.443
AEH86335.1
COGs: COG2940 Proteins containing SET domain; InterPro IPR001214; KEGG: mlo:mlr3116 hypothetical protein; PFAM: nuclear protein SET; SMART: nuclear protein SET; SPTR: Nuclear protein SET; PFAM: SET domain.
    
 0.421
AEH89830.1
COGs: COG2940 Proteins containing SET domain; InterPro IPR001214; KEGG: mlo:mll7640 hypothetical protein; PFAM: nuclear protein SET; SMART: nuclear protein SET; SPTR: Nuclear protein SET; PFAM: SET domain.
    
 0.421
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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