STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH85725.1Major facilitator superfamily MFS_1; InterPro IPR006311:IPR011701; KEGG: mlo:mll4007 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily. (432 aa)    
Predicted Functional Partners:
AEH88317.1
Major facilitator superfamily MFS_1; InterPro IPR011701; KEGG: mlo:mll1210 transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.
  
     0.763
nadD
Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
       0.580
AEH90712.1
COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR000873:IPR003679:IPR020845; KEGG: mlo:mlr6282 phosphinothricin tripeptide synthetase B; PFAM: AMP-dependent synthetase and ligase; aminoglycoside 3-N-acetyltransferase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; Aminoglycoside 3-N-acetyltransferase; TIGRFAM: amino acid adenylation domain.
  
  
 0.538
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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