STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH85743.1COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: mlo:mll3981 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase family; Belongs to the DapA family. (297 aa)    
Predicted Functional Partners:
AEH87494.1
FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: cmi:CMM_0807 putative secreted D-amino acid oxidase; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase.
 
  
 0.936
AEH85745.1
4-hydroxyproline epimerase; COGs: COG3938 Proline racemase; InterPro IPR008794; KEGG: mlo:mll3979 hydroxyproline-2-epimerase; PFAM: proline racemase; PRIAM: 4-hydroxyproline epimerase; SPTR: Proline racemase; PFAM: Proline racemase; Belongs to the proline racemase family.
 
  
 0.897
AEH85744.1
FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: mlo:mll3980 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase.
 
   
 0.870
nanE
N-acylglucosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
  
  
 0.782
AEH90303.1
Amidohydrolase 2; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: mlo:mlr7156 hypothetical protein; PFAM: amidohydrolase 2; SPTR: Amidohydrolase 2; PFAM: Amidohydrolase.
  
  
 0.770
AEH90310.1
Protein of unknown function DUF718; COGs: COG3254 conserved hypothetical protein; InterPro IPR008000; KEGG: mlo:mll7147 hypothetical protein; PFAM: protein of unknown function DUF718; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF718).
  
  
 0.754
AEH87270.1
COGs: COG3938 Proline racemase; InterPro IPR008794; KEGG: scb:SCAB_89281 putative proline racemase; PFAM: proline racemase; PRIAM: Proline racemase; SPTR: Proline racemase; PFAM: Proline racemase; Belongs to the proline racemase family.
 
  
 0.730
AEH86550.1
COGs: COG3938 Proline racemase; InterPro IPR008794; KEGG: mlo:mlr6810 proline racemase; PFAM: proline racemase; PRIAM: Proline racemase; SPTR: Proline racemase; PFAM: Proline racemase; Belongs to the proline racemase family.
 
  
 0.726
AEH85461.1
COGs: COG1605 Chorismate mutase; InterPro IPR002701:IPR020822:IPR010951; KEGG: mlo:mlr4380 chorismate mutase; PFAM: Chorismate mutase, type II; SPTR: Chorismate mutase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, alpha proteobacterial type.
  
  
 0.644
gatC
glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
  
  
 0.625
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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