STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH85865.1Protein of unknown function DUF465; COGs: COG5481 Uncharacterized conserved small protein containing a coiled-coil domain; InterPro IPR007420; KEGG: mlo:msr3794 hypothetical protein; PFAM: protein of unknown function DUF465; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF465). (67 aa)    
Predicted Functional Partners:
AEH85866.1
Protein of unknown function DUF465; COGs: COG5570 Uncharacterized small protein; InterPro IPR007420; KEGG: mlo:msl3793 hypothetical protein; PFAM: protein of unknown function DUF465; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF465).
 
     0.598
AEH86777.1
Protein of unknown function DUF1790; COGs: COG5465 conserved hypothetical protein; InterPro IPR014860; KEGG: mlo:mll2674 hypothetical protein; PFAM: Protein of unknown function DUF1790; SPTR: Mll2674 protein; PFAM: Family of unknown function (DUF1790).
  
     0.468
AEH86783.1
Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: mlo:mlr2665 transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family.
  
     0.460
AEH85432.1
Domain of unknown function DUF1737; COGs: COG5515 Uncharacterized conserved small protein; InterPro IPR013619; KEGG: mlo:msr4423 hypothetical protein; PFAM: domain of unknown function DUF1737; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1737).
  
     0.456
AEH85832.1
Helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR001650; KEGG: mlo:mlr3852 MgpS, ATP-dependent helicase; PFAM: helicase domain protein; SMART: helicase domain protein; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain.
  
     0.450
rpmJ
50S ribosomal protein L36; InterPro IPR000473; KEGG: mlo:msr3814 50S ribosomal protein L36; SPTR: 50S ribosomal protein L36; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; Belongs to the bacterial ribosomal protein bL36 family.
 
     0.427
AEH84674.1
Protein of unknown function DUF540; COGs: COG2981 Uncharacterized protein involved in cysteine biosynthesis; InterPro IPR007496; KEGG: mlo:mlr5338 CysZ-like protein; PFAM: protein of unknown function DUF540; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF540).
  
     0.416
AEH85486.1
KEGG: mlo:mlr4340 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2794).
  
     0.404
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.