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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH86496.1COGs: COG4786 Flagellar basal body rod protein; InterProIPR020013:IPR012836:IPR001444:IPR010930:IPR 019776; KEGG: mlo:mlr2907 flagellar basal body rod protein FlgF; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; SPTR: Flagellar basal-body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins. (240 aa)    
Predicted Functional Partners:
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.993
AEH86492.1
COGs: COG1558 Flagellar basal body rod protein; InterPro IPR006299:IPR001444:IPR010930; KEGG: mlo:mlr2912 flagellar basal body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; SPTR: Flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgB; Belongs to the flagella basal body rod proteins family.
 
 
 0.993
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.992
AEH86495.1
ATPase, FliI/YscN family; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR003593:IPR005714:IPR000194; KEGG: mlo:mlr2909 flagellum-specific ATP synthase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase; SPTR: ATPase, FliI/YscN family; TIGRFAM: ATPase, FliI/YscN family; PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI.
 
  
 0.990
AEH86470.1
COGs: COG1843 Flagellar hook capping protein; InterPro IPR005648; KEGG: mlo:mlr2942 flagellar basal body rod modification protein; PFAM: flagellar hook capping protein; SPTR: Flagellar hook capping protein; PFAM: Flagellar hook capping protein.
 
 
 0.988
AEH86493.1
COGs: COG1815 Flagellar basal body protein; InterPro IPR001444; KEGG: mlo:mlr2911 flagellar basal body rod protein FlgB; PFAM: flagellar basal body rod protein; SPTR: Flagellar basal body rod protein; PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB.
 
 
 0.987
AEH86481.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.981
AEH86500.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
 
 0.979
AEH86501.1
COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090; KEGG: mlo:mll2901 flagellar motor switch protein G; PFAM: flagellar motor switch protein FliG; SPTR: Flagellar motor switch protein FliG; PFAM: FliG C-terminal domain.
 
 
 0.978
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.975
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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