STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH86614.1KEGG: oan:Oant_0602 hypothetical protein; SPTR: Putative uncharacterized protein. (70 aa)    
Predicted Functional Partners:
AEH86615.1
PhnA protein; COGs: COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; InterPro IPR013988; KEGG: ara:Arad_9223 alkilphosphonate uptake protein; PFAM: PhnA protein; SPTR: PhnA protein; PFAM: PhnA protein; TIGRFAM: alkylphosphonate utilization operon protein PhnA.
       0.773
AEH86613.1
Protein of unknown function DUF1275; COGs: COG3619 membrane protein; InterPro IPR010699; KEGG: reh:H16_A2205 hypothetical protein; PFAM: protein of unknown function DUF1275; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1275).
       0.534
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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