STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH86676.1Tetratricopeptide TPR_2 repeat protein; InterPro IPR013105:IPR019734:IPR013026; KEGG: mlo:mlr2793 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; SPTR: Tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide repeat. (589 aa)    
Predicted Functional Partners:
AEH87640.1
WD40 repeat, subgroup; COGs: COG2319 FOG: WD40 repeat; InterProIPR019782:IPR017986:IPR020472:IPR001680:IPR 019781:IPR019775; KEGG: mlo:mll2069 transcriptional repressor; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat protein; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat.
  
 0.963
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
  
 0.741
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.740
AEH89126.1
Ankyrin; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110:IPR000209:IPR020683; KEGG: mlo:mll0182 hypothetical protein; PFAM: Ankyrin; SPTR: Ankyrin; PFAM: Ankyrin repeat.
 
 0.737
AEH85228.1
KEGG: mlo:mlr4759 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved repeat domain.
 
 
 0.694
AEH86356.1
GtrA family protein; COGs: COG2246 membrane protein; InterPro IPR007267:IPR006162; KEGG: mlo:mll3086 hypothetical protein; PFAM: GtrA family protein; SPTR: GtrA family protein; PFAM: GtrA-like protein.
 
    0.687
AEH89523.1
Major facilitator superfamily MFS_1; InterPro IPR011701; KEGG: mlo:mlr8206 MFS family transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1.
  
     0.670
AEH84716.1
KEGG: rmr:Rmar_1153 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.658
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.656
AEH86230.1
WD40 repeat, subgroup; COGs: COG4249 Uncharacterized protein containing caspase domain; InterProIPR019782:IPR017986:IPR019775:IPR020472:IPR 001680:IPR019781:IPR011600; KEGG: mlo:mlr3303 WD-40 repeat-containing beta transducin-like protein; PFAM: WD40 repeat, subgroup; peptidase C14 caspase catalytic subunit p20; SMART: WD-40 repeat protein; SPTR: WD-40 repeat protein; PFAM: Caspase domain; WD domain, G-beta repeat.
 
 0.655
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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