STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH86766.1COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: mlo:mll2689 non-heme chloroperoxidase; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold. (285 aa)    
Predicted Functional Partners:
AEH90712.1
COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR000873:IPR003679:IPR020845; KEGG: mlo:mlr6282 phosphinothricin tripeptide synthetase B; PFAM: AMP-dependent synthetase and ligase; aminoglycoside 3-N-acetyltransferase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; Aminoglycoside 3-N-acetyltransferase; TIGRFAM: amino acid adenylation domain.
  
 
 0.775
AEH86765.1
Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: mlo:mlr2690 transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family.
       0.530
AEH85044.1
InterPro IPR002636; KEGG: mch:Mchl_3241 protein of unknown function DUF29; PFAM: protein of unknown function DUF29; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF29.
    
  0.454
AEH90257.1
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: vap:Vapar_6064 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold.
 
  
 0.403
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.