STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH86857.1Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887:IPR000485:IPR019888:IPR019885; KEGG: mlo:mlr2554 transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; SPTR: Transcriptional regulator, AsnC family; PFAM: AsnC family. (159 aa)    
Predicted Functional Partners:
AEH85788.1
Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019885:IPR000485:IPR019887:IPR019888; KEGG: mlo:mll3910 transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; SPTR: Transcriptional regulator, AsnC family; PFAM: IclR helix-turn-helix domain; AsnC family.
  
     0.761
AEH85406.1
Transcriptional regulator, TrmB; COGs: COG1522 Transcriptional regulators; InterProIPR000485:IPR000524:IPR002831:IPR019887:IPR 019885:IPR019888; KEGG: mlo:mll4468 transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; transcriptional regulator TrmB; SMART: Transcription regulator, AsnC-type; SPTR: Transcriptional regulator, AsnC family; PFAM: HTH domain; AsnC family.
  
     0.646
AEH86858.1
COGs: COG0492 Thioredoxin reductase; InterPro IPR013027:IPR000103:IPR008255:IPR005982; KEGG: mlo:mll2552 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase.
  
  
 0.518
AEH87483.1
Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019888:IPR000485:IPR019887; KEGG: mlo:mlr6779 transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; SPTR: Transcriptional regulator, AsnC family; PFAM: HTH domain; AsnC family.
  
     0.466
AEH86856.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mlo:mlr2557 glucosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
       0.455
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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