STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH87030.1AsmA family protein; COGs: COG2982 Uncharacterized protein involved in outer membrane biogenesis; InterPro IPR020550:IPR007844; KEGG: mlo:mll6538 AsmA protein, assembly of outermembrane proteins; PFAM: AsmA family protein; SPTR: AsmA family protein; PFAM: AsmA family. (617 aa)    
Predicted Functional Partners:
AEH88416.1
Sporulation domain protein; InterPro IPR007730; KEGG: mlo:mll1090 hypothetical protein; PFAM: Sporulation domain protein; SPTR: Sporulation domain protein; PFAM: Sporulation related domain.
  
     0.737
AEH88576.1
KEGG: mlo:mlr0796 kinesin-like protein; SPTR: Kinesin-like protein.
  
     0.725
AEH90931.1
KEGG: mlo:mlr5683 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.710
AEH89262.1
KEGG: mlo:mlr0006 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.686
AEH89733.1
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.686
AEH85575.1
Putative phage tail protein; COGs: COG4223 conserved hypothetical protein; KEGG: mlo:mll4219 putative phage tail protein; SPTR: Putative phage tail protein.
  
     0.677
AEH86663.1
KEGG: mlo:mll2809 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.673
AEH85107.1
KEGG: mlo:mlr4851 hypothetical protein; SPTR: Transport protein (Permease)-like protein.
  
     0.666
AEH85228.1
KEGG: mlo:mlr4759 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved repeat domain.
  
     0.659
AEH89757.1
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.642
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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