STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH88035.1KEGG: met:M446_2771 hypothetical protein; SPTR: Putative uncharacterized protein. (289 aa)    
Predicted Functional Partners:
AEH88036.1
Hypothetical protein; KEGG: hoh:Hoch_6870 DNA polymerase III, subunits gamma and tau; SPTR: Putative uncharacterized protein.
       0.511
AEH88034.1
Conserved hypothetical protein; COGs: COG3064 Membrane protein involved in colicin uptake; InterPro IPR017023; KEGG: mlo:mll1482 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: AsmA family.
       0.506
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.