STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH88186.1Phage portal protein, lambda family; COGs: COG5511 Bacteriophage capsid protein; InterPro IPR006429; KEGG: mag:amb1171 bacteriophage capsid protein; PFAM: portal protein lambda; SPTR: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family; PFAM: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family. (514 aa)    
Predicted Functional Partners:
AEH88184.1
Terminase GpA; COGs: COG5525 Bacteriophage tail assembly protein; InterPro IPR008866; KEGG: smd:Smed_1660 phage terminase GpA; PFAM: terminase GpA; SPTR: Terminase GpA; PFAM: Phage terminase large subunit (GpA).
 
  
 0.962
AEH88190.1
KEGG: oca:OCAR_5582 phage protein GP20; SPTR: Phage protein GP20.
 
     0.856
AEH88187.1
Peptidase S49; COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR002142; KEGG: aba:Acid345_3173 peptidase S49; PFAM: peptidase S49; SPTR: Peptidase S49; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type.
 
  
 0.839
AEH88182.1
KEGG: smd:Smed_1661 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.828
AEH88183.1
Hypothetical protein.
       0.773
AEH88185.1
KEGG: azl:AZL_022080 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AEH88199.1
KEGG: mag:amb1176 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.722
AEH88188.1
Hypothetical protein; KEGG: olu:OSTLU_24245 NCS1 family transporter: cytosine/purines/uracil/thiamine/allantoin; SPTR: Putative uncharacterized protein.
       0.548
AEH88201.1
Tail tape measure protein TP901 core region; InterPro IPR010090; KEGG: bvi:Bcep1808_3229 hypothetical protein; PFAM: tail tape measure protein TP901 core region; SPTR: Putative uncharacterized protein.
 
    0.499
AEH88179.1
Phage/plasmid primase, P4 family; COGs: COG3378 ATPase; InterPro IPR006500:IPR014818:IPR014015; KEGG: bbt:BBta_6606 putative phage / plasmid primase P4; PFAM: primase P4; SPTR: Phage/plasmid primase, P4 family; TIGRFAM: phage/plasmid primase, P4 family; PFAM: D5 N terminal like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain.
  
     0.471
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.