STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH89143.1Porin; COGs: COG3637 Opacity protein and related surface antigens; InterPro IPR003684; KEGG: mlo:mll0155 outer membrane protein; PFAM: porin; SPTR: Outer membrane protein; PFAM: Porin subfamily. (221 aa)    
Predicted Functional Partners:
AEH86286.1
Protein of unknown function DUF1150; COGs: COG5568 Uncharacterized small protein; InterPro IPR009531; KEGG: mlo:msr3193 hypothetical protein; PFAM: protein of unknown function DUF1150; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1150).
  
     0.738
AEH88990.1
Outer membrane protein; COGs: COG3637 Opacity protein and related surface antigens; KEGG: mlo:mll0361 outer membrane protein-like; SPTR: Outer membrane protein-like protein.
  
     0.724
AEH88486.1
KEGG: mlo:mlr0912 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.648
AEH90024.1
COGs: COG5342 Invasion protein B involved in pathogenesis; InterPro IPR010642; KEGG: mlo:mll7488 hypothetical protein; PFAM: Invasion associated locus B family protein; SPTR: Invasion associated locus B family protein; PFAM: Invasion associated locus B (IalB) protein.
 
     0.632
AEH89733.1
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.625
AEH89757.1
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.621
AEH89755.1
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.620
AEH84958.1
Protein of unknown function DUF2506; InterPro IPR019641; KEGG: mlo:mlr5010 hypothetical protein; PFAM: Protein of unknown function DUF2506; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2628).
  
     0.592
AEH88565.1
KEGG: mlo:mlr0812 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2865).
  
     0.551
AEH85575.1
Putative phage tail protein; COGs: COG4223 conserved hypothetical protein; KEGG: mlo:mll4219 putative phage tail protein; SPTR: Putative phage tail protein.
  
     0.542
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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