STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH89206.1KEGG: mlo:mll0080 hypothetical protein; SPTR: Putative uncharacterized protein. (170 aa)    
Predicted Functional Partners:
AEH89205.1
Protein of unknown function DUF2259, secreted; COGs: COG5497 secreted protein; InterPro IPR018725; KEGG: mlo:mll0081 hypothetical protein; PFAM: Protein of unknown function DUF2259, secreted; SPTR: Putative uncharacterized protein; PFAM: Predicted secreted protein (DUF2259).
       0.790
AEH89207.1
COGs: COG0015 Adenylosuccinate lyase; InterProIPR000362:IPR003031:IPR020557:IPR004769:IPR 019468; KEGG: mlo:mll0079 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase-like; fumarate lyase; SPTR: Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.635
AEH89204.1
Protein of unknown function DUF2171; COGs: COG3798 conserved hypothetical protein; InterPro IPR018684; KEGG: mlo:msr0083 hypothetical protein; PFAM: Protein of unknown function DUF2171; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2171).
       0.534
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.