STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH89873.1Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR002328:IPR001761; KEGG: atc:AGR_C_94 putative periplasmic binding ABC transporter protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; PFAM: family. (360 aa)    
Predicted Functional Partners:
AEH89871.1
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: mlo:mlr7585 sugar ABC transporter, ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
 
  0.992
AEH89872.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: xau:Xaut_2414 monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; PFAM: Branched-chain amino acid transport system / permease component.
 
  0.983
AEH84972.1
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: mlo:mll4992 sugar (ribose) ABC-transport system ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
 
  0.902
AEH89874.1
ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000835:IPR000600; KEGG: mlo:mll7583 sugar ABC transporter, ATP binding protein; PFAM: ROK family protein; regulatory protein MarR; SPTR: ROK family protein; PFAM: ROK family; MarR family.
 
    0.876
AEH87237.1
ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: sme:SMa2004 ROK family transcriptional regulator; PFAM: ROK family protein; SPTR: ROK family protein; PFAM: ROK family.
 
    0.689
AEH89876.1
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002173:IPR011611; KEGG: mlo:mll7580 fructokinase; PFAM: PfkB domain protein; SPTR: PfkB domain protein; PFAM: pfkB family carbohydrate kinase.
 
  
 0.664
AEH89875.1
RbsD or FucU transport; COGs: COG4154 Fucose dissimilation pathway protein FucU; InterPro IPR007721; KEGG: mlo:mll7581 hypothetical protein; PFAM: RbsD or FucU transport; SPTR: RbsD or FucU transport; PFAM: RbsD / FucU transport protein family.
 
     0.649
AEH88741.1
COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR013767:IPR003661:IPR003594:IPR005467:IPR 000014:IPR004358; KEGG: rpd:RPD_0284 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein; SPTR: Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box.
   
 
 0.609
AEH86140.1
COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467:IPR001789:IPR004358:IPR003661:IPR 003594:IPR007891; KEGG: msl:Msil_3208 multi-sensor hybrid histidine kinase; PFAM: CHASE3 domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain [...]
   
 
 0.602
AEH90929.1
Multi-sensor hybrid histidine kinase; COGs: COG0591 Na+/proline symporter; InterProIPR004358:IPR013656:IPR003661:IPR003594:IPR 001789:IPR005467:IPR001734; KEGG: mlo:mll5691 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kin [...]
   
 
 0.595
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.