STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH90285.1COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: bvi:Bcep1808_6790 histone deacetylase superfamily protein; PFAM: histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: Histone deacetylase superfamily; PFAM: Histone deacetylase domain. (373 aa)    
Predicted Functional Partners:
AEH87640.1
WD40 repeat, subgroup; COGs: COG2319 FOG: WD40 repeat; InterProIPR019782:IPR017986:IPR020472:IPR001680:IPR 019781:IPR019775; KEGG: mlo:mll2069 transcriptional repressor; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat protein; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat.
  
 
 0.865
AEH90286.1
Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: bcm:Bcenmc03_4265 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
       0.789
AEH90287.1
Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: bpy:Bphyt_0147 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
       0.789
AEH90288.1
ABC transporter related protein; COGs: COG4674 Uncharacterized ABC-type transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dra:DR_A0323 UreA/short-chain amide ABC transporter, ATP-binding protein, putative; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
       0.789
AEH90289.1
ABC transporter related protein; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: aav:Aave_3817 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE.
       0.789
AEH85958.1
COGs: COG1231 Monoamine oxidase; InterPro IPR002937:IPR001613; KEGG: mlo:mll3668 monoamine oxidase A; PFAM: amine oxidase; SPTR: Amine oxidase; PFAM: Flavin containing amine oxidoreductase.
   
 0.757
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.687
AEH88174.1
DEAD-like helicase; InterPro IPR014001; KEGG: drm:Dred_1192 helicase domain-containing protein; SMART: DEAD-like helicase; SPTR: DEAD-like helicase.
    
 0.648
AEH88176.1
InterPro IPR001091:IPR002941; KEGG: drm:Dred_1193 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
    
 0.648
AEH86230.1
WD40 repeat, subgroup; COGs: COG4249 Uncharacterized protein containing caspase domain; InterProIPR019782:IPR017986:IPR019775:IPR020472:IPR 001680:IPR019781:IPR011600; KEGG: mlo:mlr3303 WD-40 repeat-containing beta transducin-like protein; PFAM: WD40 repeat, subgroup; peptidase C14 caspase catalytic subunit p20; SMART: WD-40 repeat protein; SPTR: WD-40 repeat protein; PFAM: Caspase domain; WD domain, G-beta repeat.
 
 
 0.608
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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