STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH90324.1Transcriptional regulator, DeoR family; COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036:IPR018356; KEGG: sme:SM_b21533 putative transcriptional regulator, GntR family protein; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: Transcriptional regulator, DeoR family; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain. (264 aa)    
Predicted Functional Partners:
AEH86011.1
Transcriptional regulator, DeoR family; COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR018356:IPR014036; KEGG: mlo:mll3600 transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: Transcriptional regulator, DeoR family; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain.
  
     0.774
AEH90323.1
FAD dependent oxidoreductase; COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); InterPro IPR006076:IPR006222:IPR013977; KEGG: smd:Smed_4871 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; SPTR: FAD dependent oxidoreductase; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; FAD dependent oxidoreductase; TIGRFAM: sarcosine oxidase, gamma subunit family, heterotetrameric form; Belongs to the GcvT family.
       0.566
AEH90325.1
Transcriptional regulator, GntR family; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: mlo:mlr7144 transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
     
 0.533
AEH86285.1
PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178:IPR006320; KEGG: mlo:mll3194 phosphotransferase system enzyme II; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: PTS IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN.
 
  
 0.513
AEH86002.1
COGs: COG3730 Phosphotransferase system sorbitol-specific component IIC; InterPro IPR004699; KEGG: mlo:mll3614 phosphotransferase system enzyme II, C2 component (permease); PFAM: PTS system protein II sorbitol-specific factor; SPTR: PTS system protein II sorbitol-specific factor; PFAM: PTS system enzyme II sorbitol-specific factor; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC component.
  
    0.413
AEH88636.1
COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076:IPR000447; KEGG: mlo:mll0710 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; PRIAM: Glycerol-3-phosphate dehydrogenase; SPTR: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.407
AEH90197.1
COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR000447:IPR006076; KEGG: mlo:mlr7270 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; PRIAM: Glycerol-3-phosphate dehydrogenase; SPTR: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.400
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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