STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH90613.1Transcriptional regulator, MucR family; COGs: COG4957 transcriptional regulator protein; InterPro IPR008807; KEGG: mlo:mll6119 transcriptional regulatory protein; PFAM: ROSMUCR transcriptional regulator; SPTR: Transcriptional regulator, MucR family; PFAM: ROS/MUCR transcriptional regulator protein. (155 aa)    
Predicted Functional Partners:
AEH86077.1
Protein of unknown function DUF218; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: mlo:mlr3524 hypothetical protein; PFAM: protein of unknown function DUF218; SPTR: Putative uncharacterized protein; PFAM: DUF218 domain.
  
     0.620
AEH85753.1
Protein of unknown function DUF2312; COGs: COG3750 conserved hypothetical protein; InterPro IPR018753; KEGG: mlo:mll3968 hypothetical protein; PFAM: Protein of unknown function DUF2312; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2312); Belongs to the UPF0335 family.
  
     0.610
AEH88155.1
Protein of unknown function DUF2312; COGs: COG3750 conserved hypothetical protein; InterPro IPR018753; KEGG: mlo:mll3968 hypothetical protein; PFAM: Protein of unknown function DUF2312; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2312); Belongs to the UPF0335 family.
  
     0.610
AEH88043.1
Protein of unknown function DUF1321; COGs: COG3814 conserved hypothetical protein; InterPro IPR010747; KEGG: mlo:mlr1474 hypothetical protein; PFAM: protein of unknown function DUF1321; SPTR: Putative uncharacterized protein; PFAM: Stringent starvation protein B.
  
     0.567
AEH89646.1
COGs: COG2927 DNA polymerase III chi subunit; InterPro IPR007459; KEGG: mlo:mlr7869 DNA polymerase III subunit chi; PFAM: DNA polymerase III chi subunit HolC; SPTR: DNA polymerase III chi subunit HolC; PFAM: DNA polymerase III chi subunit, HolC.
  
     0.534
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
    0.523
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.503
AEH84899.1
Double-strand break repair protein AddB; COGs: COG3893 Inactivated superfamily I helicase; InterPro IPR014153; KEGG: mlo:mll5084 hypothetical protein; SPTR: Double-strand break repair protein AddB; TIGRFAM: double-strand break repair protein AddB; TIGRFAM: double-strand break repair protein AddB, alphaproteobacterial type.
  
     0.495
AEH85574.1
Uroporphyrinogen III synthase HEM4; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
     0.491
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.470
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.