STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH90935.1COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: mlo:mll5679 hypothetical protein; PFAM: histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: Histone deacetylase superfamily; PFAM: Histone deacetylase domain. (298 aa)    
Predicted Functional Partners:
AEH87640.1
WD40 repeat, subgroup; COGs: COG2319 FOG: WD40 repeat; InterProIPR019782:IPR017986:IPR020472:IPR001680:IPR 019781:IPR019775; KEGG: mlo:mll2069 transcriptional repressor; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat protein; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat.
  
 
 0.877
AEH85958.1
COGs: COG1231 Monoamine oxidase; InterPro IPR002937:IPR001613; KEGG: mlo:mll3668 monoamine oxidase A; PFAM: amine oxidase; SPTR: Amine oxidase; PFAM: Flavin containing amine oxidoreductase.
   
 0.757
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.687
AEH88174.1
DEAD-like helicase; InterPro IPR014001; KEGG: drm:Dred_1192 helicase domain-containing protein; SMART: DEAD-like helicase; SPTR: DEAD-like helicase.
    
 0.648
AEH88176.1
InterPro IPR001091:IPR002941; KEGG: drm:Dred_1193 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
    
 0.648
AEH86230.1
WD40 repeat, subgroup; COGs: COG4249 Uncharacterized protein containing caspase domain; InterProIPR019782:IPR017986:IPR019775:IPR020472:IPR 001680:IPR019781:IPR011600; KEGG: mlo:mlr3303 WD-40 repeat-containing beta transducin-like protein; PFAM: WD40 repeat, subgroup; peptidase C14 caspase catalytic subunit p20; SMART: WD-40 repeat protein; SPTR: WD-40 repeat protein; PFAM: Caspase domain; WD domain, G-beta repeat.
 
 
 0.624
AEH86335.1
COGs: COG2940 Proteins containing SET domain; InterPro IPR001214; KEGG: mlo:mlr3116 hypothetical protein; PFAM: nuclear protein SET; SMART: nuclear protein SET; SPTR: Nuclear protein SET; PFAM: SET domain.
  
 0.602
AEH89830.1
COGs: COG2940 Proteins containing SET domain; InterPro IPR001214; KEGG: mlo:mll7640 hypothetical protein; PFAM: nuclear protein SET; SMART: nuclear protein SET; SPTR: Nuclear protein SET; PFAM: SET domain.
  
 0.602
AEH86709.1
Conserved hypothetical protein; COGs: COG0464 ATPase of the AAA+ class; KEGG: mlo:mlr2758 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: ATPase family associated with various cellular activities (AAA).
   
 0.593
AEH89956.1
CbbX protein; COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003959:IPR003593:IPR000641:IPR000470; KEGG: smd:Smed_3926 CbxX/CfqX monofunctional; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: CbbX protein; TIGRFAM: CbbX protein; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: probable Rubsico expression protein CbbX.
   
 0.593
Your Current Organism:
Mesorhizobium opportunistum
NCBI taxonomy Id: 536019
Other names: M. opportunistum WSM2075, Mesorhizobium opportunistum WSM2075, Mesorhizobium opportunistum str. WSM2075, Mesorhizobium opportunistum strain WSM2075, Mesorhizobium sp. LMG 24607, Mesorhizobium sp. WSM2075
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