STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MJE2Uncharacterized protein. (110 aa)    
Predicted Functional Partners:
A0A5C3NG87
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
   
 
 0.981
A0A5C3MW39
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.979
A0A5C3NGR5
Ribosomal protein S2.
   
 
 0.978
A0A5C3N3P3
Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.971
A0A5C3N2G5
Mitochondrial 30S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.969
A0A5C3MSY4
Uncharacterized protein.
   
 
 0.966
A0A5C3NQZ5
Mitochondrial 40s ribosomal protein.
   
 
 0.966
A0A5C3N489
Uncharacterized protein.
    
 
 0.964
A0A5C3NKJ6
MRP-S28 domain-containing protein.
   
 
 0.964
A0A5C3NHB3
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.960
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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