STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MK55WD40 repeat-like protein. (350 aa)    
Predicted Functional Partners:
A0A5C3NB23
RanBD1 domain-containing protein.
   
 0.995
A0A5C3ML40
NTF2-like protein.
    
 0.984
A0A5C3MT07
Peptidase S59 domain-containing protein.
    
 0.981
A0A5C3MUQ9
Nup96 domain-containing protein.
    
 0.981
A0A5C3MYT3
Uncharacterized protein.
    
 0.949
A0A5C3MZL7
Uncharacterized protein.
   
 0.945
A0A5C3MKK5
WD40 repeat-like protein.
  
  
 
0.884
A0A5C3N583
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.874
A0A5C3NH61
Nup54 domain-containing protein.
   
 0.868
A0A5C3NEL2
Nsp1_C domain-containing protein.
   
 0.856
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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