STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MKS1MBOAT_2 domain-containing protein. (407 aa)    
Predicted Functional Partners:
A0A5C3N9V7
Chondroitin AC/alginate lyase.
    
 0.810
A0A5C3NFH7
GTP-binding protein RAB5.
    
 0.810
A0A5C3NHF0
GTP-binding protein ypt5.
    
 0.810
A0A5C3NMC9
Chondroitin AC/alginate lyase.
    
 0.810
A0A5C3MV51
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.714
A0A5C3NCG6
Nagb/rpia/CoA transferase-like protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.631
A0A5C3MSJ5
PCI-domain-containing protein.
    
  0.627
A0A5C3NFW6
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
    
 0.609
A0A5C3NI20
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.609
A0A5C3N1L3
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.608
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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