STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MLC2Uncharacterized protein. (387 aa)    
Predicted Functional Partners:
A0A5C3N8P7
TFIID_20kDa domain-containing protein.
   
  0.983
A0A5C3N3M8
TAFII28-domain-containing protein.
    
  0.979
A0A5C3MU65
BTP domain-containing protein.
     
 0.976
A0A5C3N9S9
TAF4 domain-containing protein.
    
  0.857
A0A5C3NTB3
TFIID and SAGA subunit.
    
  0.837
A0A5C3NEW9
Uncharacterized protein.
   
  0.774
A0A5C3MV80
Uncharacterized protein.
   
 0.750
A0A5C3N8U8
Uncharacterized protein.
   
 0.749
A0A5C3NS72
TAF1 transcription initiation factor TFIID subunit TAF1.
     
 0.748
A0A5C3NEU8
RRM domain-containing protein.
   
 0.741
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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