STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MLC5Uncharacterized protein. (130 aa)    
Predicted Functional Partners:
A0A5C3NKM7
Spindle assembly checkpoint protein.
   
 0.838
A0A5C3N8P7
TFIID_20kDa domain-containing protein.
    
 0.828
A0A5C3NFY5
Uncharacterized protein.
    
 0.828
A0A5C3N418
Transcription initiation factor IID TAF10 subunit.
    
 0.827
A0A5C3N4Y3
TAF-domain-containing protein.
    
 0.826
A0A5C3N9S9
TAF4 domain-containing protein.
    
 0.826
A0A5C3MMV0
TPR-like protein.
   
 0.825
A0A5C3NI62
Uncharacterized protein.
    
 0.825
A0A5C3MZN2
CPSF_A domain-containing protein.
    
 0.821
A0A5C3NS72
TAF1 transcription initiation factor TFIID subunit TAF1.
   
 0.820
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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