STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MLT5Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. (377 aa)    
Predicted Functional Partners:
A0A5C3N7A2
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.942
A0A5C3NBP5
Tryptophan synthase.
    
 0.932
A0A5C3MMI9
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
  0.901
A0A5C3N9B4
IGPS-domain-containing protein.
  
 
  0.901
A0A5C3NH88
Isopentenyldiphosphate isomerase.
 
 
 0.896
A0A5C3NGM0
Terpenoid synthase.
    
 0.880
A0A5C3N167
Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
    
 0.879
A0A5C3MMF6
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.873
A0A5C3MUP9
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.870
A0A5C3MU09
Protein prenylyltransferase.
     
 0.851
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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