STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MMW3Uncharacterized protein. (396 aa)    
Predicted Functional Partners:
A0A5C3NK65
WD40 repeat-like protein.
    
 0.707
A0A5C3MZ81
Uncharacterized protein.
    
 0.704
A0A5C3NCY0
Uncharacterized protein.
    
 0.704
A0A5C3N3Y2
SNF5-domain-containing protein.
    
 
 0.652
A0A5C3NF83
Uncharacterized protein.
    
  0.611
A0A5C3MJY2
Histone deacetylase.
    
  0.607
A0A5C3MQD5
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.607
A0A5C3MZR2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.607
A0A5C3N1F1
Arginase/deacetylase.
    
  0.607
A0A5C3NJ95
Histone deacetylase.
    
  0.607
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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