STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MNT4LETM1-domain-containing protein. (648 aa)    
Predicted Functional Partners:
A0A5C3NH30
PX domain-containing protein.
 
     0.701
A0A5C3MUI3
Uncharacterized protein.
 
  
   0.652
A0A5C3NBI6
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.597
A0A5C3NFJ4
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.589
A0A5C3NJ68
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.588
A0A5C3NJC5
Ribosomal protein L2.
    
 
 0.588
A0A5C3NGG5
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.580
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.578
A0A5C3NGR5
Ribosomal protein S2.
   
   0.578
A0A5C3MW39
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.577
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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