STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MP73C2H2-type domain-containing protein. (405 aa)    
Predicted Functional Partners:
A0A5C3MM56
WD40 repeat-like protein.
   
 
 0.949
A0A5C3N3W9
Small nuclear ribonucleo protein.
   
    0.674
A0A5C3NKC6
Matrin-type domain-containing protein.
   
 
 0.561
A0A5C3MNL8
WD40 repeat-like protein.
   
 
 0.504
A0A5C3MYS0
RNA-binding domain-containing protein.
   
   0.473
A0A5C3N7C4
RRM domain-containing protein.
   
   0.465
A0A5C3NBJ6
Uncharacterized protein.
   
   0.465
A0A5C3NEX1
Uncharacterized protein.
   
   0.454
A0A5C3MS04
RNA-binding domain-containing protein.
   
   0.447
A0A5C3NI66
Ribosomal protein S17e.
 
      0.428
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.