STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MPJ6Protein transporter SEC24. (943 aa)    
Predicted Functional Partners:
A0A5C3MV99
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.999
A0A5C3NE13
Protein transport protein Sec22; Belongs to the synaptobrevin family.
    
 0.998
A0A5C3NFP0
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.998
A0A5C3MUT1
WD_REPEATS_REGION domain-containing protein.
   
 0.996
A0A5C3N0W7
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
   
 0.996
A0A5C3MPU3
Uncharacterized protein.
   
0.991
A0A5C3NN58
ARF/SAR superfamily; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.977
A0A5C3MVH2
Het-C-domain-containing protein.
   
 0.955
A0A5C3N383
GRASP55_65 domain-containing protein.
   
 0.901
A0A5C3NLV0
t-SNARE coiled-coil homology domain-containing protein.
    
 0.889
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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