A0A5C3MPY3 protein (Heliocybe sulcata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5C3MPY3

Uncharacterized protein. (404 aa)

Predicted Functional Partners:

A0A5C3N766

0.995

A0A5C3NET4

0.995

A0A5C3N087

0.970

A0A5C3N654

0.970

A0A5C3MWB8

0.969

A0A5C3NI84

0.963

A0A5C3MMZ2

0.940

A0A5C3MMX4

0.938

A0A5C3N1X2

0.937

A0A5C3N4M9

0.931

Your Current Organism:

Heliocybe sulcata

NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A5C3MMX4	A0A5C3MMZ2	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.998
A0A5C3MMX4	A0A5C3MPY3	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.938
A0A5C3MMX4	A0A5C3MWB8	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA mismatch repair protein MutL.	0.992
A0A5C3MMX4	A0A5C3N087	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.999
A0A5C3MMX4	A0A5C3N1X2	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA mismatch repair protein MutL.	0.988
A0A5C3MMX4	A0A5C3N4M9	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Dna2-domain-containing protein.	0.615
A0A5C3MMX4	A0A5C3N654	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.630
A0A5C3MMX4	A0A5C3N766	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Ribonuclease H-like protein.	0.734
A0A5C3MMX4	A0A5C3NET4	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	3'-5' exonuclease domain-containing protein.	0.734
A0A5C3MMX4	A0A5C3NI84	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.677
A0A5C3MMZ2	A0A5C3MMX4	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.998
A0A5C3MMZ2	A0A5C3MPY3	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Uncharacterized protein.	0.940
A0A5C3MMZ2	A0A5C3MWB8	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA mismatch repair protein MutL.	0.926
A0A5C3MMZ2	A0A5C3N087	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.977
A0A5C3MMZ2	A0A5C3N1X2	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA mismatch repair protein MutL.	0.896
A0A5C3MMZ2	A0A5C3N4M9	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Dna2-domain-containing protein.	0.751
A0A5C3MMZ2	A0A5C3N654	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.674
A0A5C3MMZ2	A0A5C3N766	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Ribonuclease H-like protein.	0.965
A0A5C3MMZ2	A0A5C3NET4	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	3'-5' exonuclease domain-containing protein.	0.965
A0A5C3MMZ2	A0A5C3NI84	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Uncharacterized protein.	0.971