STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MQ41Uncharacterized protein. (349 aa)    
Predicted Functional Partners:
A0A5C3N2G5
Mitochondrial 30S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.932
A0A5C3N3P3
Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.926
A0A5C3MW39
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.916
A0A5C3NI58
Translational machinery component.
   
 
 0.916
A0A5C3MNN5
Ribosomal protein S7.
   
 
 0.915
A0A5C3NGS5
Uncharacterized protein.
   
 
 0.913
A0A5C3MTK9
Uncharacterized protein.
   
   0.910
A0A5C3NDH1
Uncharacterized protein.
   
 
 0.907
A0A5C3NGR5
Ribosomal protein S2.
   
 
 0.906
A0A5C3NL22
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.901
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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