Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A5C3MMQ5 | A0A5C3MQU9 | 60S ribosomal protein L10. | WD40 repeat-like protein. | 0.989 |
A0A5C3MMQ5 | A0A5C3MUH4 | 60S ribosomal protein L10. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.973 |
A0A5C3MMQ5 | A0A5C3N498 | 60S ribosomal protein L10. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.958 |
A0A5C3MQ94 | A0A5C3MQU9 | Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. | WD40 repeat-like protein. | 0.804 |
A0A5C3MQ94 | A0A5C3MUH4 | Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.804 |
A0A5C3MQ94 | A0A5C3N498 | Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.957 |
A0A5C3MQU9 | A0A5C3MMQ5 | WD40 repeat-like protein. | 60S ribosomal protein L10. | 0.989 |
A0A5C3MQU9 | A0A5C3MQ94 | WD40 repeat-like protein. | Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. | 0.804 |
A0A5C3MQU9 | A0A5C3MSZ9 | WD40 repeat-like protein. | WD40 repeat-like protein. | 0.700 |
A0A5C3MQU9 | A0A5C3MT90 | WD40 repeat-like protein. | Uncharacterized protein. | 0.804 |
A0A5C3MQU9 | A0A5C3MTY9 | WD40 repeat-like protein. | Nucleotide exchange factors-like protein. | 0.804 |
A0A5C3MQU9 | A0A5C3MUH4 | WD40 repeat-like protein. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.714 |
A0A5C3MQU9 | A0A5C3N498 | WD40 repeat-like protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.706 |
A0A5C3MQU9 | A0A5C3NFQ0 | WD40 repeat-like protein. | Uncharacterized protein. | 0.791 |
A0A5C3MQU9 | A0A5C3NGS8 | WD40 repeat-like protein. | Glutamate-rich WD repeat-containing protein. | 0.791 |
A0A5C3MQU9 | A0A5C3NHH1 | WD40 repeat-like protein. | WD40 repeat-like protein. | 0.766 |
A0A5C3MSZ9 | A0A5C3MQU9 | WD40 repeat-like protein. | WD40 repeat-like protein. | 0.700 |
A0A5C3MSZ9 | A0A5C3MUH4 | WD40 repeat-like protein. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.714 |
A0A5C3MSZ9 | A0A5C3N498 | WD40 repeat-like protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.747 |
A0A5C3MSZ9 | A0A5C3NFQ0 | WD40 repeat-like protein. | Uncharacterized protein. | 0.841 |
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