STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MQX3Ribosome biogenesis protein Noc4. (633 aa)    
Predicted Functional Partners:
A0A5C3MIU8
BING4CT-domain-containing protein.
   
 0.999
A0A5C3MVJ1
Nep1-domain-containing protein.
   
 0.999
A0A5C3MZN9
DRIM domain-containing protein.
   
 0.999
A0A5C3N4T7
Sas10 domain-containing protein.
   
  0.999
A0A5C3NDE4
Nop14-like protein.
   
 0.999
A0A5C3NFA7
Nucleic acid-binding protein.
   
 0.999
A0A5C3NFG8
WD40 repeat-like protein.
   
 0.999
A0A5C3NHD3
WD40 repeat-like protein.
   
  0.999
A0A5C3NHS5
Ribosomal protein S4; Belongs to the universal ribosomal protein uS4 family.
   
  0.999
A0A5C3NIK3
WD40 repeat-like protein.
   
 0.999
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.