STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MSD5Rgp1-domain-containing protein. (929 aa)    
Predicted Functional Partners:
A0A5C3NK87
RIC1-domain-containing protein.
    
 0.997
A0A5C3NC97
GTP binding protein.
    
 0.863
A0A5C3NHR6
Dor1-domain-containing protein.
    
 0.775
A0A5C3MN69
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.767
A0A5C3NKT6
t-SNARE; Belongs to the syntaxin family.
    
 0.743
A0A5C3NIX6
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the small GTPase superfamily. Arf family.
    
  0.740
A0A5C3NCZ2
GTP-binding protein ypt1.
    
 0.731
A0A5C3NII8
Vps52-domain-containing protein.
     
 0.730
A0A5C3NM41
Vps54-domain-containing protein.
     
 0.721
A0A5C3MT25
Uncharacterized protein.
    
  0.702
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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