STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MST7E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1827 aa)    
Predicted Functional Partners:
A0A5C3N3C2
HECT domain-containing protein.
   
 0.999
A0A5C3MJU3
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.953
A0A5C3MWK8
Ubiquitin-40S ribosomal protein S31 fusion protein.
   
 0.858
A0A5C3NAE1
Putative beta-1,6-glucanase.
   
 0.804
A0A5C3NME0
ATP-dependent protein binding protein.
   
 0.804
A0A5C3MU74
Homeobox domain-containing protein.
    
 
 0.753
A0A5C3MVZ1
RING-type domain-containing protein.
   
 0.739
A0A5C3NE00
Uncharacterized protein.
    
  0.736
A0A5C3NEZ8
Uncharacterized protein.
    
  0.736
A0A5C3NKV1
Uncharacterized protein.
   
 
 0.705
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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