STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MT57P-loop containing nucleoside triphosphate hydrolase protein. (1190 aa)    
Predicted Functional Partners:
A0A5C3N373
P-loop containing nucleoside triphosphate hydrolase protein.
   
0.999
A0A5C3N4N6
SP-RING-type domain-containing protein.
    
 0.999
A0A5C3NBQ1
MAGE-domain-containing protein.
   
 0.999
A0A5C3NCE5
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.999
A0A5C3NEW2
RING-type domain-containing protein.
    
 0.999
A0A5C3MZC3
DNA/RNA polymerase.
   
 0.955
A0A5C3NNG4
Uncharacterized protein.
   
 0.955
A0A5C3N5Y4
Sister chromatid cohesion protein.
   
 0.934
A0A5C3N8K9
Uncharacterized protein.
   
 0.934
A0A5C3MV52
Uncharacterized protein.
   
 0.924
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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