STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MTG4Thioredoxin reductase. (350 aa)    
Predicted Functional Partners:
A0A5C3NII8
Vps52-domain-containing protein.
   
 0.969
A0A5C3MY75
Uncharacterized protein.
    
 0.968
A0A5C3NM41
Vps54-domain-containing protein.
   
 0.968
A0A5C3NC97
GTP binding protein.
    
 0.846
A0A5C3NIW2
Vps53_N domain-containing protein.
 
      0.839
A0A5C3MVQ0
t-SNARE coiled-coil homology domain-containing protein.
   
 0.819
A0A5C3MR81
Uncharacterized protein.
     
 0.794
A0A5C3MS51
Uncharacterized protein.
     
 0.794
A0A5C3NKT6
t-SNARE; Belongs to the syntaxin family.
    
 0.783
A0A5C3NHR6
Dor1-domain-containing protein.
   
 
 0.776
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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