STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MTK7Uncharacterized protein. (190 aa)    
Predicted Functional Partners:
A0A5C3MRF5
ERCC4 domain-containing protein.
    
 0.645
A0A5C3MPG4
Uncharacterized protein.
    
 0.618
A0A5C3NBQ6
Uncharacterized protein.
    
 0.575
A0A5C3MPP7
Nuclear transport factor 2.
    
 0.558
A0A5C3NJL3
Polyubiquitin-tagged protein recognition complex Npl4 component.
    
  0.557
A0A5C3N3H7
Uncharacterized protein.
   
  0.554
A0A5C3N862
Uncharacterized protein.
   
  0.554
A0A5C3N9A0
Uncharacterized protein.
   
  0.554
A0A5C3ND52
Uncharacterized protein.
   
  0.554
A0A5C3NHB7
Uncharacterized protein.
   
  0.554
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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