STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MUP9Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (490 aa)    
Predicted Functional Partners:
A0A5C3MU09
Protein prenylyltransferase.
    
 0.999
A0A5C3MUG6
Uncharacterized protein.
    
 0.945
A0A5C3N2S6
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.936
A0A5C3MMF6
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.934
A0A5C3NGM0
Terpenoid synthase.
   
 0.933
A0A5C3N167
Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
   
 0.881
A0A5C3MLT5
Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
   
 0.870
A0A5C3NK56
Phosphatidylinositol N-acetylglucosaminyltransferase.
     
 0.798
A0A5C3NIC6
Uncharacterized protein.
     
 0.777
A0A5C3N6D6
Isoprenoid biosynthesis-like protein; Belongs to the FPP/GGPP synthase family.
   
 0.768
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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