A0A5C3MXD7 protein (Heliocybe sulcata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5C3MXD7

Uncharacterized protein. (178 aa)

Predicted Functional Partners:

A0A5C3N9B3

0.974

A0A5C3NDK4

0.948

A0A5C3N069

0.931

A0A5C3MNE6

0.895

A0A5C3NIB8

0.888

A0A5C3MWI9

0.885

A0A5C3MZA1

0.866

A0A5C3NR21

0.866

A0A5C3MWK9

0.852

A0A5C3NAZ6

0.852

Your Current Organism:

Heliocybe sulcata

NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A5C3MNE6	A0A5C3MWI9	Ras-GAP domain-containing protein.	Ras-domain-containing protein.	0.895
A0A5C3MNE6	A0A5C3MXD7	Ras-GAP domain-containing protein.	Uncharacterized protein.	0.895
A0A5C3MNE6	A0A5C3N069	Ras-GAP domain-containing protein.	Kinase-like protein; Belongs to the protein kinase superfamily.	0.486
A0A5C3MNE6	A0A5C3NDK4	Ras-GAP domain-containing protein.	Adenylate cyclase-like protein.	0.530
A0A5C3MNE6	A0A5C3NIB8	Ras-GAP domain-containing protein.	Ras protein.	0.895
A0A5C3MWI9	A0A5C3MNE6	Ras-domain-containing protein.	Ras-GAP domain-containing protein.	0.895
A0A5C3MWI9	A0A5C3MWK9	Ras-domain-containing protein.	Uncharacterized protein.	0.852
A0A5C3MWI9	A0A5C3MXD7	Ras-domain-containing protein.	Uncharacterized protein.	0.885
A0A5C3MWI9	A0A5C3MZA1	Ras-domain-containing protein.	Uncharacterized protein.	0.866
A0A5C3MWI9	A0A5C3N069	Ras-domain-containing protein.	Kinase-like protein; Belongs to the protein kinase superfamily.	0.931
A0A5C3MWI9	A0A5C3N9B3	Ras-domain-containing protein.	RhoGAP-domain-containing protein.	0.974
A0A5C3MWI9	A0A5C3NAZ6	Ras-domain-containing protein.	Uncharacterized protein; Belongs to the DOCK family.	0.852
A0A5C3MWI9	A0A5C3NDK4	Ras-domain-containing protein.	Adenylate cyclase-like protein.	0.948
A0A5C3MWI9	A0A5C3NIB8	Ras-domain-containing protein.	Ras protein.	0.887
A0A5C3MWI9	A0A5C3NR21	Ras-domain-containing protein.	Uncharacterized protein.	0.866
A0A5C3MWK9	A0A5C3MWI9	Uncharacterized protein.	Ras-domain-containing protein.	0.852
A0A5C3MWK9	A0A5C3MXD7	Uncharacterized protein.	Uncharacterized protein.	0.852
A0A5C3MWK9	A0A5C3MZA1	Uncharacterized protein.	Uncharacterized protein.	0.713
A0A5C3MWK9	A0A5C3NAZ6	Uncharacterized protein.	Uncharacterized protein; Belongs to the DOCK family.	0.781
A0A5C3MWK9	A0A5C3NIB8	Uncharacterized protein.	Ras protein.	0.852