STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MXL0Uncharacterized protein. (438 aa)    
Predicted Functional Partners:
A0A5C3MTK7
Uncharacterized protein.
  
 
  0.542
A0A5C3MJM3
EGF-like domain-containing protein.
   
 0.527
A0A5C3NKC6
Matrin-type domain-containing protein.
    
  0.527
A0A5C3NGD7
RNA splicing factor PRP9.
    
  0.478
A0A5C3N8H3
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
  
 
   0.454
A0A5C3NCU5
14-3-3 1 protein; Belongs to the 14-3-3 family.
    
 0.446
A0A5C3N2J0
MRG-domain-containing protein.
    
  0.437
A0A5C3MWT0
Uncharacterized protein.
    
  0.427
A0A5C3N8H0
LAG1-DNAbind-domain-containing protein.
    
  0.427
A0A5C3NCP3
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
    
  0.427
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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