Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A5C3MUF3 | A0A5C3MY53 | Histone H2B; Belongs to the histone H2B family. | Uncharacterized protein. | 0.785 |
A0A5C3MUF3 | A0A5C3N2Z6 | Histone H2B; Belongs to the histone H2B family. | F-box domain-containing protein. | 0.941 |
A0A5C3MUF3 | A0A5C3N3L0 | Histone H2B; Belongs to the histone H2B family. | Uncharacterized protein. | 0.874 |
A0A5C3MUF3 | A0A5C3N3S9 | Histone H2B; Belongs to the histone H2B family. | Histone H3; Belongs to the histone H3 family. | 0.977 |
A0A5C3MUF3 | A0A5C3N593 | Histone H2B; Belongs to the histone H2B family. | Histone H3; Belongs to the histone H3 family. | 0.977 |
A0A5C3MUF3 | A0A5C3N7K6 | Histone H2B; Belongs to the histone H2B family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.990 |
A0A5C3MUF3 | A0A5C3NBM7 | Histone H2B; Belongs to the histone H2B family. | B30.2/SPRY domain-containing protein. | 0.729 |
A0A5C3MUF3 | A0A5C3NIT3 | Histone H2B; Belongs to the histone H2B family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.991 |
A0A5C3MUF3 | A0A5C3NJD3 | Histone H2B; Belongs to the histone H2B family. | WD40 repeat-like protein. | 0.749 |
A0A5C3MY53 | A0A5C3MUF3 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.785 |
A0A5C3MY53 | A0A5C3N2Z6 | Uncharacterized protein. | F-box domain-containing protein. | 0.770 |
A0A5C3MY53 | A0A5C3N3L0 | Uncharacterized protein. | Uncharacterized protein. | 0.695 |
A0A5C3MY53 | A0A5C3N3S9 | Uncharacterized protein. | Histone H3; Belongs to the histone H3 family. | 0.695 |
A0A5C3MY53 | A0A5C3N593 | Uncharacterized protein. | Histone H3; Belongs to the histone H3 family. | 0.695 |
A0A5C3MY53 | A0A5C3N7K6 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.770 |
A0A5C3MY53 | A0A5C3NBM7 | Uncharacterized protein. | B30.2/SPRY domain-containing protein. | 0.856 |
A0A5C3MY53 | A0A5C3NDG3 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.785 |
A0A5C3MY53 | A0A5C3NIT3 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.770 |
A0A5C3MY53 | A0A5C3NJD3 | Uncharacterized protein. | WD40 repeat-like protein. | 0.854 |
A0A5C3N2Z6 | A0A5C3MUF3 | F-box domain-containing protein. | Histone H2B; Belongs to the histone H2B family. | 0.941 |
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