STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MY68Methyltransf_25 domain-containing protein. (504 aa)    
Predicted Functional Partners:
A0A5C3N8C1
DUF663-domain-containing protein.
   
  0.624
A0A5C3NDQ8
Bystin-domain-containing protein.
   
  0.618
A0A5C3NE33
Eukaryotic type KH-domain (KH-domain type I).
   
  0.608
A0A5C3NGI4
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.603
A0A5C3NGQ3
LTV-domain-containing protein.
   
  0.601
A0A5C3NU63
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
    
  0.600
A0A5C3MW39
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.599
A0A5C3NBI6
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.599
A0A5C3MQW5
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.598
A0A5C3NAP0
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.598
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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