STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MYR6Uncharacterized protein. (81 aa)    
Predicted Functional Partners:
A0A5C3NK04
Transcription factor.
   
 0.880
A0A5C3N9D8
Smg4_UPF3 domain-containing protein.
    
 0.857
A0A5C3MQM4
Uncharacterized protein.
    
 0.786
A0A5C3NB21
Uncharacterized protein.
    
 0.784
A0A5C3NEF5
PINc domain-containing protein.
    
 0.784
A0A5C3N4J5
RNA-binding domain-containing protein.
    
 0.773
A0A5C3NMT8
Nuclear cap-binding protein subunit 2.
    
 0.769
A0A5C3NFQ7
Cap binding protein 80-PB.
    
 0.763
A0A5C3NIY1
RNA-binding domain-containing protein.
    
 0.742
A0A5C3MW87
Uncharacterized protein.
    
 0.732
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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