A0A5C3MYX3 protein (Heliocybe sulcata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5C3MYX3

Zn(2)-C6 fungal-type domain-containing protein. (522 aa)

Predicted Functional Partners:

A0A5C3MWK8

0.694

A0A5C3NE00

0.599

A0A5C3NEZ8

0.599

A0A5C3N5C5

0.563

A0A5C3N6E6

0.551

A0A5C3MWR5

0.513

A0A5C3NE82

0.511

A0A5C3NEC1

0.511

A0A5C3MS90

0.507

A0A5C3N9G5

0.499

Your Current Organism:

Heliocybe sulcata

NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A5C3MS90	A0A5C3MWK8	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.759
A0A5C3MS90	A0A5C3MYX3	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Zn(2)-C6 fungal-type domain-containing protein.	0.507
A0A5C3MS90	A0A5C3NE00	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Uncharacterized protein.	0.640
A0A5C3MS90	A0A5C3NEZ8	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	Uncharacterized protein.	0.640
A0A5C3MWK8	A0A5C3MS90	Ubiquitin-40S ribosomal protein S31 fusion protein.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.759
A0A5C3MWK8	A0A5C3MWR5	Ubiquitin-40S ribosomal protein S31 fusion protein.	Phosphatase tensin-type domain-containing protein.	0.733
A0A5C3MWK8	A0A5C3MYX3	Ubiquitin-40S ribosomal protein S31 fusion protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.694
A0A5C3MWK8	A0A5C3N9G5	Ubiquitin-40S ribosomal protein S31 fusion protein.	Uncharacterized protein.	0.676
A0A5C3MWK8	A0A5C3NE00	Ubiquitin-40S ribosomal protein S31 fusion protein.	Uncharacterized protein.	0.993
A0A5C3MWK8	A0A5C3NEZ8	Ubiquitin-40S ribosomal protein S31 fusion protein.	Uncharacterized protein.	0.993
A0A5C3MWR5	A0A5C3MWK8	Phosphatase tensin-type domain-containing protein.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.733
A0A5C3MWR5	A0A5C3MYX3	Phosphatase tensin-type domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.513
A0A5C3MWR5	A0A5C3NE00	Phosphatase tensin-type domain-containing protein.	Uncharacterized protein.	0.683
A0A5C3MWR5	A0A5C3NEZ8	Phosphatase tensin-type domain-containing protein.	Uncharacterized protein.	0.683
A0A5C3MYX3	A0A5C3MS90	Zn(2)-C6 fungal-type domain-containing protein.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.507
A0A5C3MYX3	A0A5C3MWK8	Zn(2)-C6 fungal-type domain-containing protein.	Ubiquitin-40S ribosomal protein S31 fusion protein.	0.694
A0A5C3MYX3	A0A5C3MWR5	Zn(2)-C6 fungal-type domain-containing protein.	Phosphatase tensin-type domain-containing protein.	0.513
A0A5C3MYX3	A0A5C3N5C5	Zn(2)-C6 fungal-type domain-containing protein.	GRIP domain-containing protein.	0.563
A0A5C3MYX3	A0A5C3N6E6	Zn(2)-C6 fungal-type domain-containing protein.	Guanylate kinase.	0.551
A0A5C3MYX3	A0A5C3N9G5	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.499